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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015902219.1_cds_XP_016452229.1_46489
CDS Infomation

[gene=LOC107776816] [db_xref=GeneID:107776816] [protein=putative late blight resistance protein homolog R1A-3 isoform X2] [protein_id=XP_016452229.1] [location=complement(join(41056..41060,42219..43524))] [gbkey=CDS]
Sequence

ATGGAGGGATTGGAAGAAGTGACTGCTAGTCATTTAGACTATCTTATTTATAAAAGTCTT
GTTATAGTTAGCAAGCGAAGTTTGGATGGTAAAATCATGACATGTATGATTCATGATCTT
GTTCATGATTTCTTGTTGAGAGAATCCGACAGCCAGAGTCTTTTGTGTGTTGAAACTACC
AAAACTAAAGGACTCGGATGGGTTTCTCCTCAAGGTTGTAGGTGGGTATCAAAACAAATT
CGTCCGGGTTATGGTCGCCATCAATTCCATGATCCTTCTTATAGCAAATTACGTTCCTTT
TCTATCCACCAATCTGGTCTGTTCCTTGATATAGAAAGCTTTCCGTTCAAACTTCTTAGG
GTATTGGACTTGGAGTATTTTACAAATATCCGTTTTCCCGAAGCTATACTAGACCTAGTT
CTTTTAAGGTATTTGGCATTGAAGATTAGGAAGTCTGGAAAATTACCAATTTCTAAACTT
CTGAATTTACAAACTCTCACTGTTCGTCCACATCCAATATACACTAGTTTATGGAAAATG
TACTCCTTACCAAATGGAATTTGGAAATTATCTCAGTTAAGGCATCTCCATTGTTGGTGT
ATGTATTTGGCCTCTCCTCAGACGACATCAGAAAATGAGGTGAAGAACTTGGTTTTGGAA
AACTTACAAACTGTTTCTGGGTTGAGACCTTCTTGTTGCACCAAGGAAATATTTGAAGGG
ATTAAGAAAGTGAAGAAATTGGAAATTGCTGGCAAAGCAGAGGAATTTCATAGTGAAAAG
GGATGGCATAATAATCTTAAATATTTAGAAGAGCTCGAAGCACTAAATGTTGAAGTTCTG
CCCTATAGTGACTTTGAGCCATGTTTAATAAATCTAAGTCCAGGTTCTTTCCCACCAAAT
CTCAAGAAGTTAACACTTAGCGGTACTTGTATTCCATGGAACTGCATGAACATTTTTAGC
AAGTTGCCCAATCTCGAGGTGCTCGAATTGAAGGAGGATGCCTTCTCAGGCGATGAGTGG
GAAATAACAGAGATGGGATTCCCTAAATTGAAGTTTTTACTCCTTGAGTATTTGTTTCTT
AAATATTGGACAGCCACCGATGATTATTTCCAATGCCTTGAGCGTGTATACATCAGAGAT
TGCGTATACTTACAAGAGATCCCAGAAGGATTTGCAGATAGTGTGACGCTGCAGCTAATT
GAGTTACATAATTGTCGTCATCCTCTTGTGACTTTTGCGGAGCAGATCCAGGAAAAGCAT
GAGGAATTGGGAAACAACATGCTTAAAGTTTACGCCTTTGATTCAAGTTAG

Peptide Sequence

PEP ID

XP_016452229.1
PEP Infomation

PREDICTED: putative late blight resistance protein homolog R1A-3 isoform X2 [Nicotiana tabacum]
Sequence

MEGLEEVTASHLDYLIYKSLVIVSKRSLDGKIMTCMIHDLVHDFLLRESDSQSLLCVETT
KTKGLGWVSPQGCRWVSKQIRPGYGRHQFHDPSYSKLRSFSIHQSGLFLDIESFPFKLLR
VLDLEYFTNIRFPEAILDLVLLRYLALKIRKSGKLPISKLLNLQTLTVRPHPIYTSLWKM
YSLPNGIWKLSQLRHLHCWCMYLASPQTTSENEVKNLVLENLQTVSGLRPSCCTKEIFEG
IKKVKKLEIAGKAEEFHSEKGWHNNLKYLEELEALNVEVLPYSDFEPCLINLSPGSFPPN
LKKLTLSGTCIPWNCMNIFSKLPNLEVLELKEDAFSGDEWEITEMGFPKLKFLLLEYLFL
KYWTATDDYFQCLERVYIRDCVYLQEIPEGFADSVTLQLIELHNCRHPLVTFAEQIQEKH
EELGNNMLKVYAFDSS

Transcript Sequence

Gene sequence data has not been registered.